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ConTra is a promoter alignment analysis tool to identify transcription factor binding sites across species.

if ConTra was used to obtain data for publication, please cite the corresponding article

Step 1 (out of 4): select the type of analysis and specify the gene(s)/transcript(s) to be subjected to analysis

Type of analysis   Visualization: Identify binding sites for 1 or several transcription factors (TFs) in the cross-species alignment of my promoter(s).   Exploration: Identify which transcription factors (TFs) can regulate my gene(s)/transcript(s).   Enter your e-mail address to receive the results   (optional for visualisation, obligatory for exploration) Gene(s) or transcript(s) Human gene(s) or transcript(s) Example: ATOH7 more examples...   valid input: human gene name or symbol, Ensembl gene ID (ENSG), entrez gene ID, RefSeq (NM_) or Ensembl transcript ID (ENST) alignment file [multifasta, maf or CLUSTAL format] Use your own PWM collection [optional] upload file with your own PWMs format

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